BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C11LP1|AL426190
(760 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1195 0.0
>3x_Contig1772
Length = 25851
Score = 1195 bits (603), Expect = 0.0
Identities = 668/687 (97%), Gaps = 2/687 (0%)
Strand = Plus / Minus
Query: 76 taaaaagtttaatactgaagttattcagaaactatatacagcaactgatttttaaaattt 135
|||||| |||||| || || |||| || || |||||| ||||| | || ||| ||||||
Sbjct: 25795 taaaaattttaatgcttaatttatgcataagctatatgcagcagcgtatgttttaaattt 25736
Query: 136 gttcttccaccataaagctaaat-catacaagactaattggtt-cttacgacgttggaat 193
||||| || ||||||| ||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 25735 gttctgccggcataaaggtaaatgcatacaagactaattggtttcttacgacgttggaat 25676
Query: 194 tccaaccaggcttttagttcgcaaaatatccatttcacagaccatcttgaatatgatcca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25675 tccaaccaggcttttagttcgcaaaatatccatttcacagaccatcttgaatatgatcca 25616
Query: 254 ttaatcgtctcacgagcttcatcataaacgatcttagagcaatactggctcataattaag 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25615 ttaatcgtctcacgagcttcatcataaacgatcttagagcaatactggctcataattaag 25556
Query: 314 aatgttcgttcagggcccaatggattgtggagacattcgtctaagtgtcgagtgagatca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25555 aatgttcgttcagggcccaatggattgtggagacattcgtctaagtgtcgagtgagatca 25496
Query: 374 tttgttttcaagattaatagtacaacactgggtattttcgaaagaatactcatcaaatca 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25495 tttgttttcaagattaatagtacaacactgggtattttcgaaagaatactcatcaaatca 25436
Query: 434 accaacaagtctccttcagttatttttgaagacataactgccatttcctcctgagatctt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25435 accaacaagtctccttcagttatttttgaagacataactgccatttcctcctgagatctt 25376
Query: 494 ggtttagagatatcgtaattcaacgcggtatcaatactacggccagtaattgcagctgca 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25375 ggtttagagatatcgtaattcaacgcggtatcaatactacggccagtaattgcagctgca 25316
Query: 554 aataggggaacctgctcgtcattgacatgggcaaactgtttcgcataataatgtaatttc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25315 aataggggaacctgctcgtcattgacatgggcaaactgtttcgcataataatgtaatttc 25256
Query: 614 tcttggtcttgatcaaggagcgctaaccaaaatttggcatagtctcgtctcatctccgta 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25255 tcttggtcttgatcaaggagcgctaaccaaaatttggcatagtctcgtctcatctccgta 25196
Query: 674 gtaggtgttctgtataacccgtggtcatatagaatgatttcgaaattatgacccttatat 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25195 gtaggtgttctgtataacccgtggtcatatagaatgatttcgaaattatgacccttatat 25136
Query: 734 ggcttttctagcgccctgatggccaag 760
|||||||||||||||||||||||||||
Sbjct: 25135 ggcttttctagcgccctgatggccaag 25109
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5596
Number of Sequences: 1807
Number of extensions: 5596
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 760
length of database: 10,358,551
effective HSP length: 16
effective length of query: 744
effective length of database: 10,329,639
effective search space: 7685251416
effective search space used: 7685251416
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)